Integrative Modelling of Biomolecular Interactions-EMBO
Date: 02/Jul/2018 Time: 09:00 - 06/Jul/2018 Time: 18:00
Cost: Fees are specified on the course website.
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CLICK HERE TO DOWNLOAD THE BOOK OF ABSTRACTS.
Day 1 – 2 July 2018
9:00-9:30
Registration, Welcome address (A. Valencia, BSC) & Opening remarks
Alexandre Bonvin
9:30-11:00
Lecture: General Introduction to Protein-Protein Interactions
Shoshana Wodak, Marc F Lensink
11:00-11:30
Coffee break
11:30-13:00
Lecture: Principles of Docking I -Sampling
Paul Bates
13:00-14:30
Lunch break
14:30-16:30
Practical: UDOCK - Interactive docking system
Matthieu Montes
16:30-17:00
Coffee Break
17:00-19:00
Participants flash presentations
19:00
Welcome drinks and dinner
Day 2 – 3 July 2018
9:20-9:30
Day briefing
9:30-11:00
Lecture: Principles of Docking II - Scoring
Juan Fernandez-Recio
11:00-11:30
Coffee break
11:30-13:00
Lecture: Information-driven Docking
Alexandre Bonvin
13:00-14:30
Lunch break
14:30-16:30
Practical: Integrative docking with HADDOCK
Alexandre Bonvin, João Rodrigues
16:30-17:00
Coffee Break
17:30-19:00
Practical: pyDock
Fernandez-Recio & Jimenes & Diaz
18:30-19:00
Visit to Mare Nostrum supercomputer cluster
Day 3 – 4 July 2018
9:20-9:30
Day briefing
9:30-11:00
Lecture: Bioinformatics & Interface Prediction
Raphael Guerois
11:00-11:30
Coffee break
11:30-13:00
Lecture: Protein-ligand interactions and design
Birte Höcker
13:00-14:30
Lunch break
14:30-17:00
Practical: Protein-ligand interaction design
Birte Höcker, Horst Lechner
17:00-17:30
Coffee Break
17:30-19:00
Practical: Scoring docking models using co-evolution
Jessica Andreani
19:00-21:00
Poster Session & Buffet Dinner
Day 4 – 5 July 2018
9:20-9:30
Day briefing
9:30-11:00
Lecture: Integration of Cryo-EM data in docking
Matteo Dal Peraro
11:00-11:30
Coffee break
11:30-13:00
Lecture: Integrative structure determination of macromolecular assemblies
Maya Topf
13:00-14:30
Lunch break
14:30-16:30
Practical: Integrative structure determination of macromolecular assemblies
Maya Topf, Sony Malhotra
16:30-17:00
Coffee Break
17:00-18:30
Practical: Bring your own problem & CASP-CAPRI
18:30-19:30
Lecture: Interactomes & Disease
Patrick Aloy
19:30- …
Free time
Travel to dinner location
21:00
Course Dinner
Day 5 – 6 July 2018
9:20-9:30
Day briefing
9:30-11:00
Lecture: Structure Determination of Genomes
Marti-Renom
11:00-11:30
Coffee break
11:30-13:00
Lecture: Elastic network modelling in the study of macromolecular assemblies
Turkan Haliloglu
13:00-14:30
Lunch break
14:30-16:30
Practical: Binding affinity prediction
Iain Moail
16:30-17:00
Coffee break
17:00-18:00
Q&A/Round Table: Challenges in the docking field
18:00
Departure