Course: Simulation Environments for Life Sciences
Date: 14/Mar/2013 Time: 09:00 - 15/Mar/2013 Time: 18:00
Place: The course will take place in
Barcelona Supercomputing Centre,
within the UPC Campus Nord premises.
Room VS219, Vertex Building (green on the map)
S indicates that the room is 2 floors below the entrance level.
Target group: Level: for trainees with some theoretical and practical knowledge
Prerequisites: Basic knowledge of structural bioinformatics Basic knowledge of parallelization strategies Material will be provided during the course, students are welcome to provide their own use cases.
Cost:
There is no registration fee. The attendees would need to cover the expenses for travel, accommodation and meals.
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Objectives
The course will make the attendants familiar with simulation technologies used in Life Sciences and their specific adaptation to HPC environment
Detailed outline:
Introduction to biomolecular simulation
Coarse-grained and atomistic simulation strategies
Automated setup for simulation
HPC specifics: Large scale parallelization, use of GPU’s
Storage and strategies for large scale trajectory analysis
Learning Outcomes: Setup, execute, and analyze standard simulations in HPC environment
NOTE: PATC courses do not charge fees.
PLEASE BRING YOUR OWN LAPTOP.
Recommended Accomodation:
Please follow the link for map of some local hotels.
Contact Us:
CONTACT US for further details about MSc, PhD, Post Doc studies, exchanges and collaboration in education and training with BSC.
For further details about Postgraduate Studies in UPC - Barcelona School of Informatics (FiB), visit the website.
Sponsors:
The PATC Courses at BSC are funded by BSC and the PRACE 3IP Project.
If you want to learn more about PRACE Project, visit the website.
